PHATRDRAFT_3211 peptidasechymotrypsin:pdz dhr glgf (Trypsin_2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_3211 chr_1 peptidasechymotrypsin:pdz dhr glgf (Trypsin_2) 478317 479386 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0068

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PDZ_serine_protease PDZ domain of trypsin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins... cl00117 70.3612 1.99E-15 228 - 326 specific 238487
PDZ superfamily PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif).... - 70.3612 1.99E-15 228 - 326 superfamily 260201
Trypsin_2 Trypsin-like peptidase domain; This family includes trypsin like peptidase domains. cl19303 108.87 1.03E-28 43 - 192 specific 257693
Trypsin_2 superfamily Trypsin-like peptidase domain; This family includes trypsin like peptidase domains. - 108.87 1.03E-28 43 - 192 superfamily 267656

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
34684 Not available 140384 198451 53379 Not available Not available 537128

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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