PHATRDRAFT_42643 zinc knuckle familyexpressed (COG1293)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42643 chr_1 zinc knuckle familyexpressed (COG1293) 684151 687867 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0399

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF3441 superfamily Domain of unknown function (DUF3441); This presumed domain is functionally uncharacterized. This... - 117.049 3.16E-30 1117 - 1220 superfamily 256729
DUF3441 superfamily Domain of unknown function (DUF3441); This presumed domain is functionally uncharacterized. This... - 117.049 3.16E-30 1117 - 1220 superfamily 256729
DUF814 superfamily Domain of unknown function (DUF814); This domain occurs in proteins that have been annotated as... - 90.732 3.43E-21 603 - 710 superfamily 253311
COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription] - 220.341 4.23E-61 13 - 733 multi-dom 224212

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
270000 Not available 181482 217046 50161 Cre17.g734961.t1.1 AT5G49930.1 557667

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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