PHATRDRAFT_53969 (MutS)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_53969 chr_1 (MutS) 808636 813141 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0196

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0176
 0.24

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MutS_V MutS domain V; This domain is found in proteins of the MutS family (DNA mismatch repair proteins)... cl17201 334.152 5.33E-105 1152 - 1410 specific 249899
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 334.152 5.33E-105 1152 - 1410 superfamily 266551
MutS_III MutS domain III; This domain is found in proteins of the MutS family (DNA mismatch repair proteins... cl17822 134.479 3.88E-34 799 - 1145 specific 253074
MutS_III superfamily MutS domain III; This domain is found in proteins of the MutS family (DNA mismatch repair proteins... - 134.479 3.88E-34 799 - 1145 superfamily 266862
MutS_I superfamily MutS domain I; This domain is found in proteins of the MutS family (DNA mismatch repair proteins)... - 116.135 1.18E-29 381 - 494 superfamily 250754
MutS_I superfamily MutS domain I; This domain is found in proteins of the MutS family (DNA mismatch repair proteins)... - 116.135 1.18E-29 381 - 494 superfamily 250754
MutS Mismatch repair ATPase (MutS family) [DNA replication, recombination, and repair] - 503.355 8.58E-159 381 - 1410 multi-dom 223327

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
261781 Not available 212924 190397 253618 Cre05.g235750.t1.2 AT4G02070.2 353490

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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