PHATRDRAFT_41667 autophagy 3 (Autophagy_N superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_41667 chr_1 autophagy 3 (Autophagy_N superfamily) 829200 830108 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0427

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Autophagy_N superfamily Autophagocytosis associated protein (Atg3), N-terminal domain; Autophagocytosis is a starvation-... - 144.796 2.07E-42 3 - 151 superfamily 252296
Autophagy_act_C superfamily Autophagocytosis associated protein, active-site domain; Autophagocytosis is a starvation-induced... - 103.84 4.43E-28 184 - 245 superfamily 202841
Autophagy_act_C superfamily Autophagocytosis associated protein, active-site domain; Autophagocytosis is a starvation-induced... - 103.84 4.43E-28 184 - 245 superfamily 202841
Autophagy_Cterm superfamily Autophagocytosis associated protein C-terminal; Autophagocytosis is a starvation-induced process... - 51.3751 4.21E-09 270 - 294 superfamily 255950
Autophagy_Cterm superfamily Autophagocytosis associated protein C-terminal; Autophagocytosis is a starvation-induced process... - 51.3751 4.21E-09 270 - 294 superfamily 255950

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
35360 Not available 264374 326924 420280 Cre02.g102350.t1.2 AT5G61500.1 317232

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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