PHATRDRAFT_31768 elongation factor ts (tsf)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_31768	chr_1	elongation factor ts (tsf)	879524	880378	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0142

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0256	0.28	270 1600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UBA		Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members...	cl00153	33.5867	0.00783595	17 - 38	specific	238116
UBA superfamily		Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members...	-	33.5867	0.00783595	17 - 38	superfamily	260220
tsf		translation elongation factor Ts; Translational elongation factor Ts (EF-Ts) catalyzes the exchange...	-	161.099	4.35E-47	2 - 282	multi-dom	232832

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
9318		Not available	207150	256460	231822	Cre10.g435500.t1.1	AT4G11120.1	352454

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments