PHATRDRAFT_42762 kinesin light chain (TPR)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42762 chr_1 kinesin light chain (TPR) 1028984 1031125 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0383

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0243
 0.22

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 45.834 3.36E-06 568 - 677 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 45.834 3.36E-06 568 - 677 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 45.834 3.36E-06 568 - 677 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 45.834 3.36E-06 568 - 677 superfamily 238112
TPR_12 Tetratricopeptide repeat; Tetratricopeptide repeat. - 36.9714 0.00242395 404 - 464 multi-dom 257749
TPR_12 Tetratricopeptide repeat; Tetratricopeptide repeat. - 36.9714 0.00242395 404 - 464 multi-dom 257749
TPR_11 TPR repeat; TPR repeat. - 39.2191 0.000354008 438 - 509 multi-dom 257739
TPR_12 Tetratricopeptide repeat; Tetratricopeptide repeat. - 36.9714 0.00242395 404 - 464 multi-dom 257749

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 179910 236153 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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