PHATRDRAFT_9609 lipophosphoglycan biosynthetic protein (VRG4)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_9609	chr_1	lipophosphoglycan biosynthetic protein (VRG4)	1040724	1041850	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0122

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0136	0.58	0.00053 630

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
nst superfamily		UDP-galactose transporter; The 10-12 TMS Nucleotide Sugar Transporters (TC 2.A.7.10)Nucleotide-...	-	47.7349	8.07E-07	108 - 303	superfamily	129885
VRG4		Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational...	-	138.097	5.47E-38	13 - 309	multi-dom	227402

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
32706		Not available	173717	204026	100482	Cre12.g490100.t1.2	AT2G13650.3	560249

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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