PHATRDRAFT_42768 n-ethylmaleimide-sensitive factor nsf sec18p (AAA)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_42768	chr_1	n-ethylmaleimide-sensitive factor nsf sec18p (AAA)	1053398	1055362	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0193

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0123	0.20	1.1 4.6

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAA		The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an...	cl18944	71.0231	2.08E-14	262 - 456	specific	99707
AAA superfamily		The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an...	-	71.0231	2.08E-14	262 - 456	superfamily	267297
AAA		ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety...	-	53.9165	7.92E-09	295 - 458	multi-dom	214640

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
262675		Not available	185338	320699	100162	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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