PHATRDRAFT_17519 40s ribosomal protein s16 (PLN00210)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_17519	chr_1	40s ribosomal protein s16 (PLN00210)	1135796	1136455	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0146

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0228	0.14	760 130000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PLN00210		40S ribosomal protein S16; Provisional	cl00334	253.493	3.33E-87	3 - 143	specific	177799
Ribosomal_S9 superfamily		Ribosomal protein S9/S16; This family includes small ribosomal subunit S9 from prokaryotes and S16...	-	253.493	3.33E-87	3 - 143	superfamily	260362

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
40312		Not available	234775	322776	445255	Cre13.g573351.t1.2	AT5G18380.1	355047

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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