PHATRDRAFT_8747 (COG1739)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_8747 chr_1 (COG1739) 1171185 1171757 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0174

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0220
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UPF0029 superfamily Uncharacterized protein family UPF0029; Uncharacterized protein family UPF0029. - 160.332 2.04E-50 4 - 111 superfamily 250442
UPF0029 superfamily Uncharacterized protein family UPF0029; Uncharacterized protein family UPF0029. - 160.332 2.04E-50 4 - 111 superfamily 250442
Elongation_Factor_C superfamily Elongation factor G C-terminus. This domain includes the carboxyl terminal regions of elongation... - 35.9207 0.000647153 123 - 189 superfamily 261447
COG1739 Uncharacterized conserved protein [Function unknown] - 173.652 2.94E-54 1 - 187 multi-dom 224653

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
264413 Not available 245972 196368 464790 Cre10.g448800.t1.1 AT4G38090.1 486473

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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