PHATRDRAFT_31919 ribosomal protein l5 (PTZ00069)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_31919 chr_1 ribosomal protein l5 (PTZ00069) 1262074 1263076 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0151

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0197
 0.17

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L18_L5e Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the... cl00379 94.5291 3.47E-24 31 - 180 specific 238246
Ribosomal_L18_L5e superfamily Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the... - 94.5291 3.47E-24 31 - 180 superfamily 260392
Ribosomal_L18_c superfamily Ribosomal L18 C-terminal region; This domain is the C-terminal end of ribosomal L18/L5 proteins. - 129.207 3.76E-37 201 - 292 superfamily 258399
Ribosomal_L18_c superfamily Ribosomal L18 C-terminal region; This domain is the C-terminal end of ribosomal L18/L5 proteins. - 129.207 3.76E-37 201 - 292 superfamily 258399
PTZ00069 60S ribosomal protein L5; Provisional - 417.162 1.53E-146 1 - 302 multi-dom 240254

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
802 Not available 208522 294204 434648 Cre14.g621450.t1.2 AT3G25520.1 286118

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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