PHATRDRAFT_42844 tiny fragments locus 9c (TrmA)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_42844	chr_1	tiny fragments locus 9c (TrmA)	1292126	1294361	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0209

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0192	0.20	0.69 12

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AdoMet_MTases superfamily		S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases...	-	94.9356	1.92E-21	355 - 682	superfamily	266528
TrmA		SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation,...	-	164.796	1.57E-44	348 - 680	multi-dom	225174

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
269917		Not available	195515	154965	445278	Cre02.g101950.t1.2	AT2G28450.2	496969

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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