PHATRDRAFT_42910 (RF-1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42910 chr_1 (RF-1) 1495702 1497177 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0038

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0249
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RF-1 RF-1 domain; This domain is found in peptide chain release factors such as RF-1 and RF-2, and a... cl17422 96.0986 6.86E-24 387 - 452 specific 249886
RF-1 superfamily RF-1 domain; This domain is found in peptide chain release factors such as RF-1 and RF-2, and a... - 96.0986 6.86E-24 387 - 452 superfamily 266672
AdoMet_MTases superfamily S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases... - 36.4619 0.00875044 155 - 275 superfamily 266528

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 164410 291192 Not available Not available Not available 383672

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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