PHATRDRAFT_42942 (DENN)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42942 chr_1 (DENN) 1585903 1590562 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0396

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DENN DENN (AEX-3) domain; DENN (after differentially expressed in neoplastic vs normal cells) is a... cl11519 207.801 1.09E-60 411 - 597 specific 251116
DENN superfamily DENN (AEX-3) domain; DENN (after differentially expressed in neoplastic vs normal cells) is a... - 207.801 1.09E-60 411 - 597 superfamily 264408
ArfGap superfamily Putative GTPase activating protein for Arf; Putative zinc fingers with GTPase activating proteins (... - 68.0315 3.93E-13 102 - 193 superfamily 261296
dDENN dDENN domain; This region is always found associated with pfam02141. It is predicted to form a... cl04084 61.0717 4.18E-11 777 - 839 specific 251966
dDENN superfamily dDENN domain; This region is always found associated with pfam02141. It is predicted to form a... - 61.0717 4.18E-11 777 - 839 superfamily 262010
uDENN Domain always found upstream of DENN domain, found in a variety of signalling proteins; The uDENN... cl04085 60.4261 1.06E-10 255 - 355 specific 214824
uDENN superfamily uDENN domain; This region is always found associated with pfam02141. It is predicted to form an all... - 60.4261 1.06E-10 255 - 355 superfamily 262011

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 208302 5747 Not available Cre12.g511600.t1.1 AT1G49040.1 468694

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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