PHATRDRAFT_1785 ada2b dna binding transcription factor (COG5114)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_1785 chr_1 ada2b dna binding transcription factor (COG5114) 2143053 2145266 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0053

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ZZ_ADA2 Zinc finger, ZZ type. Zinc finger present in ADA2, a putative transcriptional adaptor, and related... cl00295 67.7028 1.73E-14 5 - 35 specific 239075
ZZ superfamily Zinc finger, ZZ type. Zinc finger present in dystrophin, CBP/p300 and many other proteins. The ZZ... - 67.7028 1.73E-14 5 - 35 superfamily 241760
SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain... cl17250 46.4146 6.22E-07 61 - 105 specific 238096
SANT superfamily 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain... - 46.4146 6.22E-07 61 - 105 superfamily 266586
SWIRM superfamily SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues... - 44.9251 2.61E-06 357 - 433 superfamily 252594
COG5114 Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics] - 214.164 4.20E-64 3 - 433 multi-dom 227445

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
30969 Not available 138305 250307 202596 Cre02.g089150.t1.1 AT4G16420.2 551398

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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