PHATRDRAFT_17862 p68-like protein (DEADc)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_17862 chr_1 p68-like protein (DEADc) 2160679 2163198 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0226

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0123
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DEADc DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in... cl17251 297.474 7.30E-98 132 - 337 specific 238167
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 297.474 7.30E-98 132 - 337 superfamily 266587
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 140.451 1.54E-39 348 - 479 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 140.451 1.54E-39 348 - 479 superfamily 238034
PTZ00424 helicase 45; Provisional - 216.231 3.44E-64 129 - 507 multi-dom 185609

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
42515 Not available 205426 234329 428126 Cre01.g028200.t1.1 AT5G63120.2 538125

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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