PHATRDRAFT_43159 (PHD)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43159 chr_1 (PHD) 2193158 2200950 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0489

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Bromodomain Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone... cl02556 45.8262 1.46E-05 962 - 1066 specific 99922
Bromodomain superfamily Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone... - 37.7017 0.00727108 1431 - 1459 superfamily 261339
PHD PHD-finger; PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner... cl17445 59.0456 2.50E-10 1896 - 1936 specific 250011
PHD superfamily PHD-finger; PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner... - 59.0456 2.50E-10 1896 - 1936 superfamily 266687
Bromodomain superfamily Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone... - 37.7017 0.00727108 1431 - 1459 superfamily 261339
CAF-1_p150 Chromatin assembly factor 1 complex p150 subunit, N-terminal; CAF-1_p150 is a polypeptide subunit... - 41.0067 0.00148164 298 - 425 multi-dom 256525

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 252552 200108 Not available Not available Not available 293066

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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