PHATRDRAFT_17948 retinoblastoma binding protein 4 (WD40 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_17948 chr_1 retinoblastoma binding protein 4 (WD40 superfamily) 2437139 2438721 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0150

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 132.844 2.86E-35 154 - 442 superfamily 238121
CAF1C_H4-bd superfamily Histone-binding protein RBBP4 or subunit C of CAF1 complex; The CAF-1 complex is a conserved... - 102.697 7.04E-27 40 - 108 superfamily 256943
CAF1C_H4-bd superfamily Histone-binding protein RBBP4 or subunit C of CAF1 complex; The CAF-1 complex is a conserved... - 102.697 7.04E-27 40 - 108 superfamily 256943
COG2319 FOG: WD40 repeat [General function prediction only] - 110.563 1.07E-26 148 - 450 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
42508 Not available 210566 210354 350324 Cre12.g523200.t1.1 AT5G58230.1 260120

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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