PHATRDRAFT_46440 novel proteinvertebrate nucleoporin 107kda (Nup84_Nup100 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46440	chr_10	novel proteinvertebrate nucleoporin 107kda (Nup84_Nup100 superfamily)	345965	349057	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0150

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0104	0.29	81 81

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Nup84_Nup100 superfamily		Nuclear pore protein 84 / 107; Nup84p forms a complex with five proteins, of which Nup120p, Nup85p...	-	130.547	2.43E-31	271 - 850	superfamily	252391

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
269064		Not available	258674	328864	Not available	Not available	Not available	311060

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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