PHATRDRAFT_46479 translation initiation factor eif-2b epsilon subunit (eIF-2B_epsilon_N)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_46479 chr_10 translation initiation factor eif-2b epsilon subunit (eIF-2B_epsilon_N) 466699 468975 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0210

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2; N-... cl11394 228.646 2.49E-69 23 - 240 specific 133040
Glyco_tranf_GTA_type superfamily Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a... - 228.646 2.49E-69 23 - 240 superfamily 264347
W2_eIF2B_epsilon C-terminal W2 domain of eukaryotic translation initiation factor 2B epsilon; eIF2B is a... cl17013 145.094 6.13E-40 576 - 752 specific 211396
W2 superfamily C-terminal domain of eIF4-gamma/eIF5/eIF2b-epsilon; This domain is found at the C-terminus of... - 145.094 6.13E-40 576 - 752 superfamily 266498
LbetaH superfamily Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each... - 97.2634 4.95E-24 352 - 428 superfamily 260227
GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/... - 138.236 1.36E-35 22 - 433 multi-dom 224129

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
25729 Not available 194160 189252 459808 Not available AT2G34970.1 488460

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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