PHATRDRAFT_28056 5-methyltetrahydropteroyltriglutamate--homocysteine s-methyltransferase (PLN02475)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_28056 chr_10 5-methyltetrahydropteroyltriglutamate--homocysteine s-methyltransferase (PLN02475) 942239 944610 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0337

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0207
 0.26

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CIMS_C_terminal_like CIMS - Cobalamine-independent methonine synthase, or MetE, C-terminal domain_like. Many members... cl00464 376.953 5.06E-124 425 - 746 specific 239427
URO-D_CIMS_like superfamily The URO-D_CIMS_like protein superfamily includes bacterial and eukaryotic uroporphyrinogen... - 339.508 2.85E-109 5 - 364 superfamily 260440
URO-D_CIMS_like superfamily The URO-D_CIMS_like protein superfamily includes bacterial and eukaryotic uroporphyrinogen... - 339.508 2.85E-109 5 - 364 superfamily 260440
PLN02475 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase - 1233.88 0 4 - 756 multi-dom 215264

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 228154 Not available Not available Cre03.g180750.t1.2 AT3G03780.3 471713

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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