PHATRDRAFT_28234 ribosomal protein l8 (PTZ00180)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_28234	chr_11	ribosomal protein l8 (PTZ00180)	507553	508549	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0146

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0228	0.14	760 130000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ribosomal_L2_C superfamily		Ribosomal Proteins L2, C-terminal domain; Ribosomal Proteins L2, C-terminal domain.	-	151.923	6.05E-46	96 - 227	superfamily	202823
Ribosomal_L2_C superfamily		Ribosomal Proteins L2, C-terminal domain; Ribosomal Proteins L2, C-terminal domain.	-	151.923	6.05E-46	96 - 227	superfamily	202823
Ribosomal_L2 superfamily		Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, RNA binding domain.	-	61.4367	7.99E-13	11 - 90	superfamily	249659
Ribosomal_L2 superfamily		Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, RNA binding domain.	-	61.4367	7.99E-13	11 - 90	superfamily	249659
PTZ00180		60S ribosomal protein L8; Provisional	-	419.524	8.26E-149	1 - 256	multi-dom	173464

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
264201		Not available	272576	240642	200700	Cre12.g535851.t1.1	AT4G36130.1	338451

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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