PHATRDRAFT_36892 mgc132032 protein (CCL1)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_36892	chr_11	mgc132032 protein (CCL1)	610163	611001	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0303

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0109	0.44	3.3 10

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CYCLIN		Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control....	cl00050	42.6109	7.71E-06	36 - 101	specific	238003
CYCLIN superfamily		Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control....	-	42.6109	7.71E-06	36 - 101	superfamily	260157
CCL1		Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair...	-	50.5012	1.16E-07	36 - 244	multi-dom	227640

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	238087	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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