PHATRDRAFT_51018 ribosomal proteincomponent of cytosolic 80s ribosome and 60s large subunit (PLN00185)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_51018 chr_12 ribosomal proteincomponent of cytosolic 80s ribosome and 60s large subunit (PLN00185) 8475 13746 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0146

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0228
 0.14

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L4 superfamily Ribosomal protein L4/L1 family; This family includes Ribosomal L4/L1 from eukaryotes and... - 243.591 6.70E-78 32 - 284 superfamily 260356
Ribos_L4_asso_C superfamily 60S ribosomal protein L4 C-terminal domain; This family is found at the very C-terminal of 60... - 99.6059 5.40E-26 290 - 368 superfamily 258544
Ribos_L4_asso_C superfamily 60S ribosomal protein L4 C-terminal domain; This family is found at the very C-terminal of 60... - 99.6059 5.40E-26 290 - 368 superfamily 258544
PLN00185 60S ribosomal protein L4-1; Provisional - 632.608 0 24 - 397 multi-dom 177779

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 453373 Cre09.g397697.t1.1 AT5G02870.2 353589

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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