PHATRDRAFT_37067 gtp-binding protein (PRK09601)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_37067 chr_12 gtp-binding protein (PRK09601) 96761 97925 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0135

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0201
 0.30

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
YchF YchF GTPase; YchF is a member of the Obg family, which includes four other subfamilies of GTPases:... cl17170 413.393 1.66E-144 7 - 277 specific 206687
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 413.393 1.66E-144 7 - 277 superfamily 266525
TGS_YchF_C TGS_YchF_C: This subfamily represents TGS domain-containing YchF GTP-binding protein, a universally... cl15768 157.736 1.42E-47 279 - 361 specific 133440
TGS superfamily The TGS domain, named after the ThrRS, GTPase, and SpoT/RelA proteins where it occurs, is... - 157.736 1.42E-47 279 - 361 superfamily 265779
PRK09601 GTP-binding protein YchF; Reviewed - 618.233 0 1 - 363 multi-dom 236583

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
511 Not available 180204 212392 64403 Cre13.g562150.t1.2 AT1G56050.1 296986

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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