PHATRDRAFT_21290 initiation factor 2 subunit familyexpressed (GCD2)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_21290	chr_12	initiation factor 2 subunit familyexpressed (GCD2)	214542	215699	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0229

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0123	0.20	1.1 4.6

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GCD2		Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal...	cl00348	186.808	1.02E-55	149 - 376	specific	224105
IF-2B superfamily		Initiation factor 2 subunit family; This family includes initiation factor 2B alpha, beta and delta...	-	186.808	1.02E-55	149 - 376	superfamily	260372

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
6056		Not available	141955	196803	431349	Cre16.g662902.t1.1	AT3G07300.2	312818

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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