PHATRDRAFT_47039 eukaryotic translation initiation factor 5 (eIF-5_eIF-2B superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47039	chr_12	eukaryotic translation initiation factor 5 (eIF-5_eIF-2B superfamily)	250783	252103	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0029

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
W2_eIF5		C-terminal W2 domain of eukaryotic translation initiation factor 5; eIF5 functions as a GTPase...	cl17013	105.006	5.61E-27	249 - 403	specific	211399
W2 superfamily		C-terminal domain of eIF4-gamma/eIF5/eIF2b-epsilon; This domain is found at the C-terminus of...	-	105.006	5.61E-27	249 - 403	superfamily	266498
eIF-5_eIF-2B superfamily		Domain found in IF2B/IF5; This family includes the N terminus of eIF-5, and the C terminus of eIF-2...	-	121.585	1.92E-33	22 - 134	superfamily	266499

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
39740		Not available	170249	259313	469449	Not available	Not available	559899

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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