PHATRDRAFT_13643 mgc82338 protein (DRE_TIM_HMGL)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_13643	chr_12	mgc82338 protein (DRE_TIM_HMGL)	823057	824108	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0353

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DRE_TIM_HMGL		3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain; 3-hydroxy-3-methylglutaryl-CoA...	cl18962	455.314	9.31E-162	15 - 298	specific	163676
DRE_TIM_metallolyase superfamily		DRE-TIM metallolyase superfamily; The DRE-TIM metallolyase superfamily includes 2-isopropylmalate...	-	455.314	9.31E-162	15 - 298	superfamily	267315
LeuA		Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism]	-	229.056	1.82E-71	12 - 303	multi-dom	223197

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	261491	416107	Cre12.g485550.t1.2	AT2G26800.1	315765

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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