PHATRDRAFT_37371 c-5 sterol (ERG3)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_37371	chr_12	c-5 sterol (ERG3)	851704	852683	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0427

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0106	0.31	810 41000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
FA_hydroxylase		Fatty acid hydroxylase superfamily; This superfamily includes fatty acid and carotene hydroxylases...	cl01132	50.977	1.79E-08	150 - 267	specific	252387
FA_hydroxylase superfamily		Fatty acid hydroxylase superfamily; This superfamily includes fatty acid and carotene hydroxylases...	-	50.977	1.79E-08	150 - 267	superfamily	260804
ERG3		Sterol desaturase [Lipid metabolism]	-	55.9221	2.28E-09	150 - 288	multi-dom	225546

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3126		Not available	218274	197357	349708	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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