PHATRDRAFT_21485 eukaryotic translation initiation factorsubunit 6 (eIF3_N)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_21485 chr_13 eukaryotic translation initiation factorsubunit 6 (eIF3_N) 147844 149470 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0142

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0246
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
eIF3_N superfamily eIF3 subunit 6 N terminal domain; This is the N terminal domain of subunit 6 translation initiation... - 118.934 3.51E-32 13 - 154 superfamily 255368
eIF3_N superfamily eIF3 subunit 6 N terminal domain; This is the N terminal domain of subunit 6 translation initiation... - 118.934 3.51E-32 13 - 154 superfamily 255368
PCI PCI domain; This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15). cl02111 67.2564 8.09E-14 277 - 381 specific 250589
PCI superfamily PCI domain; This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15). - 67.2564 8.09E-14 277 - 381 superfamily 261183

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
27083 Not available 172037 66464 426559 Cre12.g498100.t1.2 AT3G57290.1 552766

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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