PHATRDRAFT_28620 nadh dehydrogenase1 alpha13 (GRIM-19 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_28620	chr_13	nadh dehydrogenase1 alpha13 (GRIM-19 superfamily)	205588	206096	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0030

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0249	0.32	29000 800000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GRIM-19 superfamily		GRIM-19 protein; This family consists of several eukaryotic gene associated with retinoic-...	-	127.47	3.97E-38	8 - 124	superfamily	148050

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
38261		Not available	256224	283463	100956	Cre16.g664600.t1.2	AT2G33220.1	287246

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments