PHATRDRAFT_13855 rna pseudouridine synthase family protein (RsuA)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_13855 chr_13 rna pseudouridine synthase family protein (RsuA) 281276 281968 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0073

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
S4 S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged... cl09940 39.9254 3.25E-05 1 - 43 specific 238095
S4 superfamily S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged... - 39.9254 3.25E-05 1 - 43 superfamily 263930
PseudoU_synth superfamily Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to... - 142.063 3.83E-42 55 - 217 superfamily 260207
RsuA 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation,... - 179.746 1.04E-55 1 - 217 multi-dom 224108

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
264063 Not available 142798 170317 56325 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments