PHATRDRAFT_37547 ankyrin repeat (ANK)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_37547	chr_13	ankyrin repeat (ANK)	384796	386035	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0193

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0087	0.27	25000 31000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	87.8242	4.05E-21	227 - 345	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	87.8242	4.05E-21	227 - 345	superfamily	238125
Ank_2		Ankyrin repeats (3 copies); Ankyrin repeats (3 copies).	-	73.4443	2.83E-16	257 - 356	multi-dom	257303
Ank_4		Ankyrin repeats (many copies); Ankyrin repeats (many copies).	-	48.786	7.20E-08	224 - 273	multi-dom	257947

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	118166	198231	Not available	Not available	382717

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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