PHATRDRAFT_13895 photosystem ii stability assembly factor hcf136 (PLN00033)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_13895	chr_13	photosystem ii stability assembly factor hcf136 (PLN00033)	567277	568269	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0486

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0220	0.29	4300 20000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PSII_BNR superfamily		Photosynthesis system II assembly factor YCF48; YCF48 is one of several assembly factors of the...	-	454.042	1.12E-160	1 - 329	superfamily	259007
PLN00033		photosystem II stability/assembly factor; Provisional	-	564.055	0	1 - 330	multi-dom	215035

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
38769		Not available	259589	314068	425813	Cre06.g273700.t1.2	AT5G23120.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments