PHATRDRAFT_47416 wd40 repeat protein (WD40 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47416	chr_13	wd40 repeat protein (WD40 superfamily)	574317	575597	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0457

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0132	0.29	26 6900

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
WD40 superfamily		WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions...	-	72.3676	1.45E-14	106 - 370	superfamily	238121
COG2319		FOG: WD40 repeat [General function prediction only]	-	71.6583	7.46E-14	37 - 370	multi-dom	225201

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3292		Not available	259586	181880	Not available	Cre03.g178050.t1.1	AT2G47790.1	312990

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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