PHATRDRAFT_47434 ids-4 protein (SPX)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47434	chr_13	ids-4 protein (SPX)	611092	612531	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0309

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0039	0.39	64000000 0.0000099

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SPX superfamily		SPX domain; We have named this region the SPX domain after (SYG1, Pho81 and XPR1). This 180 residue...	-	75.9301	1.56E-16	1 - 227	superfamily	251734
SPX superfamily		SPX domain; We have named this region the SPX domain after (SYG1, Pho81 and XPR1). This 180 residue...	-	75.9301	1.56E-16	1 - 227	superfamily	251734

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
1779		Not available	259654	175264	Not available	Not available	Not available	353720

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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