PHATRDRAFT_54743 mgc83346 protein (WD40)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_54743	chr_13	mgc83346 protein (WD40)	627796	628839	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0392

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0234	0.45	69 19000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
WD40 superfamily		WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions...	-	180.609	7.30E-54	49 - 347	superfamily	238121
WD40 superfamily		WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions...	-	180.609	7.30E-54	49 - 347	superfamily	238121
PQQ_2		PQQ-like domain; This domain contains several repeats of the PQQ repeat.	-	46.6144	2.76E-06	79 - 312	multi-dom	257688

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
13794		Not available	180356	322383	463519	Cre04.g226450.t1.1	AT1G10580.1	543227

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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