PHATRDRAFT_14180 dna repair protein rad54-like (SNF2_N)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_14180 chr_14 dna repair protein rad54-like (SNF2_N) 251945 253872 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0199

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0042
 0.42

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... cl17251 96.2524 2.54E-23 35 - 186 specific 238005
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 96.2524 2.54E-23 35 - 186 superfamily 266587
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 90.76 1.33E-21 351 - 482 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 90.76 1.33E-21 351 - 482 superfamily 238034
SNF2_N SNF2 family N-terminal domain; This domain is found in proteins involved in a variety of processes... - 247.2 4.24E-77 14 - 319 multi-dom 249654

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
12846 Not available 137473 101559 451464 Cre10.g430950.t1.1 AT3G19210.2 560615

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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