PHATRDRAFT_14600 hnh endonuclease (HNHc)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_14600	chr_15	hnh endonuclease (HNHc)	138286	138720	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0385

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0183	0.27	2.9 4.4

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HNHc		HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic...	cl00083	60.5631	3.14E-13	73 - 127	specific	238038
HNHc superfamily		HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic...	-	60.5631	3.14E-13	73 - 127	superfamily	260180

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
bd410		Not available	155133	253202	58098	Cre04.g217903.t1.1	AT2G23840.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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