PHATRDRAFT_47853 (BaeS)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47853 chr_15 (BaeS) 240966 245693 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0047

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0037
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:... cl00075 76.9166 3.07E-16 576 - 682 specific 238030
HATPase_c superfamily Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:... - 76.9166 3.07E-16 576 - 682 superfamily 260175
REC Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... cl19078 70.2973 6.90E-14 748 - 854 specific 238088
REC superfamily Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... - 70.2973 6.90E-14 748 - 854 superfamily 267431
HisKA Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed... cl00080 43.7404 2.58E-05 453 - 523 specific 119399
HisKA superfamily Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed... - 43.7404 2.58E-05 453 - 523 superfamily 260177
CHASE This domain is found in the extracellular portion of receptor-like proteins - such as serine/... cl01369 90.0866 4.14E-20 255 - 364 specific 215015
CHASE superfamily CHASE domain; This domain is found in the extracellular portion of receptor-like proteins - such as... - 90.0866 4.14E-20 255 - 364 superfamily 260903
AAA_28 AAA domain; AAA domain. cl19128 87.62 2.01E-19 948 - 1130 specific 257841
AAA_17 superfamily AAA domain; AAA domain. - 87.62 2.01E-19 948 - 1130 superfamily 267481

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
263228 Not available 210991 298924 462927 Not available Not available 348519

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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