PHATRDRAFT_22095 yptv4_volcagtp-binding protein yptv4 (rab2 homolog) (PLN03108)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_22095	chr_15	yptv4_volcagtp-binding protein yptv4 (rab2 homolog) (PLN03108)	666851	667627	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0037

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Rab2		Rab GTPase family 2 (Rab2); Rab2 is localized on cis-Golgi membranes and interacts with Golgi...	cl17170	330.154	6.31E-116	3 - 171	specific	206658
Ras_like_GTPase superfamily		Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase...	-	330.154	6.31E-116	3 - 171	superfamily	266525
PLN03108		Rab family protein; Provisional	-	353.092	2.55E-124	1 - 210	multi-dom	178655

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
18220		Not available	171152	199836	437605	Cre09.g390763.t1.1	AT4G17170.1	483962

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments