PHATRDRAFT_38362 2-isopropylmalate synthase (PRK12344)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_38362 chr_15 2-isopropylmalate synthase (PRK12344) 714479 716725 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0191

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0218
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DRE_TIM_LeuA3 Desulfobacterium autotrophicum LeuA3 and related proteins, N-terminal catalytic TIM barrel domain;... cl18962 416.085 2.12E-142 8 - 278 specific 163679
DRE_TIM_metallolyase superfamily DRE-TIM metallolyase superfamily; The DRE-TIM metallolyase superfamily includes 2-isopropylmalate... - 416.085 2.12E-142 8 - 278 superfamily 267315
LeuA_dimer LeuA allosteric (dimerisation) domain; This is the C-terminal regulatory (R) domain of alpha-... cl07212 77.1394 9.52E-17 471 - 565 specific 214910
LeuA_dimer superfamily LeuA allosteric (dimerization) domain; This is the C-terminal regulatory (R) domain of alpha-... - 77.1394 9.52E-17 471 - 565 superfamily 263229
PRK12344 putative alpha-isopropylmalate/homocitrate synthase family transferase; Provisional - 729.579 0 8 - 572 multi-dom 237068

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
29183 Not available 157093 189706 231620 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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