PHATRDRAFT_14639 at5g36790 f5h8_20 (HAD-SF-IIA)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_14639	chr_15	at5g36790 f5h8_20 (HAD-SF-IIA)	754511	755401	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0391

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0144	0.19	0.62 1800

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HAD_like superfamily		Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-...	-	58.9207	1.45E-11	6 - 231	superfamily	119389
HAD_like superfamily		Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-...	-	58.9207	1.45E-11	6 - 231	superfamily	119389
HAD-SF-IIA		Haloacid Dehalogenase Superfamily Class (subfamily) IIA; This model represents one structural...	-	136.687	5.05E-39	6 - 234	multi-dom	233422

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
261766		Not available	Not available	192430	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments