PHATRDRAFT_14778 abc transporter family protein (ABC_ATPase superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_14778 chr_16 abc transporter family protein (ABC_ATPase superfamily) 236263 237887 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0356

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0007
 0.60

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 215.213 5.21E-66 1 - 215 superfamily 266551
ABC2_membrane ABC-2 type transporter; ABC-2 type transporter. cl17235 127.759 3.20E-34 303 - 515 specific 250332
ABC2_membrane superfamily ABC-2 type transporter; ABC-2 type transporter. - 127.759 3.20E-34 303 - 515 superfamily 266576
drrA daunorubicin resistance ABC transporter ATP-binding subunit; This model describes daunorubicin... - 105.935 1.30E-25 2 - 298 multi-dom 130256
COG0842 ABC-type multidrug transport system, permease component [Defense mechanisms] - 59.5604 3.66E-10 309 - 510 multi-dom 223912

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
bd1237 Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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