PHATRDRAFT_48282 (E_set_GO_C)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_48282 chr_16 (E_set_GO_C) 719534 725803 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0419

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0058
 0.36

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
E_set_GO_C C-terminal Early set domain associated with the catalytic domain of galactose oxidase; E or &... cl09101 112.332 1.95E-28 860 - 959 specific 199882
E_set superfamily Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or... - 112.332 1.95E-28 860 - 959 superfamily 263719
RICIN Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The... cl15820 65.9898 2.75E-12 241 - 369 specific 238092
RICIN superfamily Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The... - 65.9898 2.75E-12 241 - 369 superfamily 265792
RICIN Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The... cl15820 65.9898 2.75E-12 241 - 369 specific 238092
RICIN superfamily Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The... - 65.9898 2.75E-12 241 - 369 superfamily 265792
RICIN Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The... cl15820 65.9898 2.75E-12 241 - 369 specific 238092
RICIN superfamily Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The... - 65.9898 2.75E-12 241 - 369 superfamily 265792
Kelch Kelch domain; Kelch domain. cl02701 40.6195 0.000282224 774 - 825 specific 128874
Kelch_3 superfamily Galactose oxidase, central domain; Galactose oxidase, central domain. - 40.6195 0.000282224 774 - 825 superfamily 261412

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments