PHATRDRAFT_22332 htransporter (pgp related) family member (haf-4) (MdlB)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_22332	chr_16	htransporter (pgp related) family member (haf-4) (MdlB)	741005	742774	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0214

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0239	0.32	68 7100

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ABC_ATPase superfamily		ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of...	-	220.104	3.51E-67	308 - 563	superfamily	266551
ABC_membrane superfamily		ABC transporter transmembrane region; This family represents a unit of six transmembrane helices....	-	77.3332	4.95E-16	1 - 257	superfamily	250039
MdlB		ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	-	315.908	1.73E-99	14 - 564	multi-dom	224055

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
32325		Not available	188910	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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