PHATRDRAFT_48338 caf1 family (CAF1 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48338	chr_17	caf1 family (CAF1 superfamily)	153949	156171	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0141

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0152	0.19	3600 5100

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CAF1 superfamily		CAF1 family ribonuclease; The major pathways of mRNA turnover in eukaryotes initiate with...	-	58.8003	4.78E-10	340 - 452	superfamily	248145
CAF1 superfamily		CAF1 family ribonuclease; The major pathways of mRNA turnover in eukaryotes initiate with...	-	58.8003	4.78E-10	340 - 452	superfamily	248145

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
23762		Not available	183679	323770	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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