PHATRDRAFT_54915 cysk2_schpo cysteine synthase 2 (o-acetylserine sulfhydrylase 2) (o-acetylserine-lyase 2) (csase 2) (CBS_like)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_54915	chr_17	cysk2_schpo cysteine synthase 2 (o-acetylserine sulfhydrylase 2) (o-acetylserine-lyase 2) (csase 2...	650414	651610	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0361

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0065	0.38	270 430

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CBS_like		CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a...	cl00342	297.888	3.97E-99	15 - 321	specific	107204
Trp-synth-beta_II superfamily		Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-...	-	297.888	3.97E-99	15 - 321	superfamily	260370
PLN02565		cysteine synthase	-	133.896	5.97E-36	5 - 321	multi-dom	166206

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
38294		Not available	166658	295354	74893	Cre16.g664250.t1.2	AT1G55880.1	284757

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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