PHATRDRAFT_39062 (UBA)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_39062	chr_18	(UBA)	235641	236456	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0315

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0082	0.37	3.1 500

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UBA		Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members...	cl00153	44.7575	7.64E-07	4 - 41	specific	238116
UBA superfamily		Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members...	-	44.7575	7.64E-07	4 - 41	superfamily	260220

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
2150		Not available	235806	301942	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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