PHATRDRAFT_4423 histone deactylase of possible bacterial origin with ankyrin repeats at the n-terminus (HDAC_classII_2)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_4423	chr_18	histone deactylase of possible bacterial origin with ankyrin repeats at the n-terminus (...	289133	290116	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0241

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0136	0.58	0.00053 630

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HDAC_classII_2		Histone deacetylases and histone-like deacetylases, classII; This subfamily includes eukaryotic as...	cl17011	324.85	8.45E-111	1 - 284	specific	212541
Arginase_HDAC superfamily		Arginase-like and histone-like hydrolases; Arginase-like/histone-like hydrolase superfamily...	-	324.85	8.45E-111	1 - 284	superfamily	266496

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268655		Not available	206710	257624	447983	Cre11.g477800.t1.1	Not available	561066

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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